SeattleSeq Variation Annotation

Download Example Input Files. SeattleSeq Ann. 138 hg19. Input Variation List File for Annotation. Use reference NCBI 38hg38. Annotations for the NCBI gene model will be returned. SNVs only unless otherwise indicated. VCF SNVs and Indels SNVs andor indels. Specify output file format. SeattleSeq tabular file format. Specify column numbers first is 1. Reference allele 0 if not present. Second allele can be same as first allele column. One genotype per line. GATK bed indels only.

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TITLE

SeattleSeq Variation Annotation

DESCRIPTION

Download Example Input Files. SeattleSeq Ann. 138 hg19. Input Variation List File for Annotation. Use reference NCBI 38hg38. Annotations for the NCBI gene model will be returned. SNVs only unless otherwise indicated. VCF SNVs and Indels SNVs andor indels. Specify output file format. SeattleSeq tabular file format. Specify column numbers first is 1. Reference allele 0 if not present. Second allele can be same as first allele column. One genotype per line. GATK bed indels only.

CONTENT

This domain snp.gs.washington.edu states the following, "Input Variation List File for Annotation." Our analyzers observed that the website stated " Annotations for the NCBI gene model will be returned." The Website also stated " SNVs only unless otherwise indicated. VCF SNVs and Indels SNVs andor indels. Specify column numbers first is 1. Reference allele 0 if not present. Second allele can be same as first allele column."

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